PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG010270.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 764aa MW: 82212.3 Da PI: 7.7625

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG010270.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.3	9.4e-16	455	494	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+C+CkkskClk+YCeCf+ag++Cse C+C++C Nk + TRIDC5BG010270.7 455 SCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPS 494 689**********************************976 PP
2	TCR	50.6	3.9e-16	540	578	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN TRIDC5BG010270.7 540 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 578 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 764 aa Download sequence
IGTFRIRLPS AFVDFDSPVF NFINNLSPIP PPKPQDSSHN VHLFKSSDLA PVSSIFASPH 60 VNPPKESKLL IRDDSVQLSQ DSNSPNSVRT RLGSAIRLIK CKNIVSENCS FTCHLNQGPI 120 DSSANRSNST SKLPQTIQFV GDSLECGKNQ SADGKKDLAR DQESIELEGV LLDHTGPDKI 180 DSSQPGRIVH ENQQCEQQKD GFTAYDGDYL ITHESSMDML RLAPPCEADT QLVNETLNAD 240 NVFSGNSLLT DGPSGSYINN AAHDPNLYWD GTVEGPTTDY TPQLLSGACQ SQSVSNDQIC 300 NAVEEPSDHI PIDQSALSQN MRGMRRRCLF NEKAGAVNKA AKKTSDRHSA NTTTPRCKTN 360 SGDKPVRTPP CALPGIGLHL NALAPISTDK IVPQAAQSTI NQASNFPCAV SSSTAEPNIV 420 NEDSSQAIVV ANADESGQGS PKKKRHKFDD GDGTSCKRCS CKKSKCLKLY CECFHAGVFC 480 SEPCSCQGCL NKPSNMEIVL STREQIESRN PLAFAPKVIR TSEPGQELGE YPNKTPASAR 540 HKRGCNCKKS SCLKKYCECY QGGVGCSISC RCEGCKNAFG RREGLGPLSI EEAKQGNEEN 600 SACVKEEKKE DDNNQLVICP AANPAPAENV LTTPSAMDVR PLASRPPSSS KRPRSTTKAL 660 GHPSRLCNSQ APLKTDTLLS PFENYAEIMF GVGTSDSLKG GLSPQTSVKV VSPNKKRVSP 720 PRIGTGLSPI CKSGRKLILK SIPSFPSLCG DVNNVDTKTT SPAP

Sequence ? help Back to Top

Protein Sequence Length: 764 aa Download sequence

IGTFRIRLPS AFVDFDSPVF NFINNLSPIP PPKPQDSSHN VHLFKSSDLA PVSSIFASPH  60
VNPPKESKLL IRDDSVQLSQ DSNSPNSVRT RLGSAIRLIK CKNIVSENCS FTCHLNQGPI  120
DSSANRSNST SKLPQTIQFV GDSLECGKNQ SADGKKDLAR DQESIELEGV LLDHTGPDKI  180
DSSQPGRIVH ENQQCEQQKD GFTAYDGDYL ITHESSMDML RLAPPCEADT QLVNETLNAD  240
NVFSGNSLLT DGPSGSYINN AAHDPNLYWD GTVEGPTTDY TPQLLSGACQ SQSVSNDQIC  300
NAVEEPSDHI PIDQSALSQN MRGMRRRCLF NEKAGAVNKA AKKTSDRHSA NTTTPRCKTN  360
SGDKPVRTPP CALPGIGLHL NALAPISTDK IVPQAAQSTI NQASNFPCAV SSSTAEPNIV  420
NEDSSQAIVV ANADESGQGS PKKKRHKFDD GDGTSCKRCS CKKSKCLKLY CECFHAGVFC  480
SEPCSCQGCL NKPSNMEIVL STREQIESRN PLAFAPKVIR TSEPGQELGE YPNKTPASAR  540
HKRGCNCKKS SCLKKYCECY QGGVGCSISC RCEGCKNAFG RREGLGPLSI EEAKQGNEEN  600
SACVKEEKKE DDNNQLVICP AANPAPAENV LTTPSAMDVR PLASRPPSSS KRPRSTTKAL  660
GHPSRLCNSQ APLKTDTLLS PFENYAEIMF GVGTSDSLKG GLSPQTSVKV VSPNKKRVSP  720
PRIGTGLSPI CKSGRKLILK SIPSFPSLCG DVNNVDTKTT SPAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	8e-75	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG010270.7