PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG011730.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 113aa    MW: 12427.6 Da    PI: 8.4638
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG011730.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-191264156
               AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                      ++y+GVr+++ +g+++AeIrd      ++ r +lg+f+taeeAa+a+++ + +++g+
  TRIDC5BG011730.1 12 TKYRGVRRRP-SGKFAAEIRDS---SrQSVRKWLGTFDTAEEAARAYDRSAYAMRGH 64
                      69********.7*********3...2236**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
DQAGKDGGGE STKYRGVRRR PSGKFAAEIR DSSRQSVRKW LGTFDTAEEA ARAYDRSAYA  60
MRGHLAVLNF PAEARNYVRG GSSSSQQQVI ELECLDDEVL QDMLRDGGGG RNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.11e-31ERF family protein