PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG011790.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 803aa    MW: 92944.5 Da    PI: 5.3141
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG011790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1638.5e-20202284191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn+YA  +GF+ ++ +++ +      +k ++ C+++gk++ + +  +++r++++ ++t+C+ak+ vk++ +g+we t++++eHnH+l+p
  TRIDC5BG011790.1 202 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLT-KGQWEFTTVRNEHNHPLCP 284
                       5*****************9998......4678**********99988.99999******************.9****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 803 aa     Download sequence    
MPPSPGADTQ KFVMGDMVTE LDEAGVRNAE NSTEQREAYN VVDDEGSPVP LLMLPSGKEP  60
VGNQSMTEGR LQPAGDNYQE PVGKQSMTEG TLQPAGDNDQ DPSSDSVEKN TEGLLADGQD  120
QQTNSVYHPL QQAEEENQLH DNVESNEMLR NNSSSETDSD SSSGSDSDSE VGKYFYPQIE  180
QLEMAKQPEP GMKFQTLEDA HRFYNTYALL TGFEAKRGTN YMRKKFHLIC NRSGKSRATP  240
DLQRKRKRKS IEKTNCQAKV IVKLTKGQWE FTTVRNEHNH PLCPSASLTK FYLSHKHIST  300
EERSFLKVLQ RTRIPPNKVM KIFRRMRGSF GSIPFKKKDG TNLLCAEQHR KENSDVGRML  360
MYFKEKELQD PSFQCMKQTD EDNIVRSVFW TDARSRMDYE IFGDFLLFDT TYTTDRHNML  420
FAPIIGLNNH GRTLLLGCAL LHDESTETYK WMFETLLHVM EDKMPVSIIT NQDEAMAKAI  480
GEVMPQVRHW LCKWDVLEKA QQNISAFIAE SGNIKADLDS LVDNSLTEKE FEEGWDALIE  540
RYGASENEYL QILWQRRKNW VPVYFREDFY PFVQSHGCDK GMNLLFNDYV LSIDRIEKFI  600
ERYEEIYKNI TKTDEEDRLQ TGTVPSCFSL QPIEKHAADI YTRQIFLKVQ RELLHSTAFN  660
VQEVQRGAVY RLNKVFNYEN PEFDRNNFEV QVESGTNAFK CQCAKFTRDG VLCCHIFRLF  720
TQFGINQIPE QYIVPRWTEK FREEKEKQYK EKCSEQMDTT MRYTNFMTKM ADLGKTICSD  780
GAKYDAFMLE VDKIQENFAT AQK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1244249RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-79FAR1 family protein