PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG011790.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 792aa MW: 91834.3 Da PI: 5.3117

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG011790.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63	8.3e-20	191	273	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +GF+ ++ +++ + +k ++ C+++gk++ + + +++r++++ ++t+C+ak+ vk++ +g+we t++++eHnH+l+p TRIDC5BG011790.3 191 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLT-KGQWEFTTVRNEHNHPLCP 273 5***************9998......4678******99988.99999**************.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 792 aa Download sequence
FVMGDMVTEL DEAGVRNAEN STEQREAYNV VDDEGSPVPL LMLPSGKEPV GNQSMTEGRL 60 QPAGDNYQEP VGKQSMTEGT LQPAGDNDQD PSSDSVEKNT EGLLADGQDQ QTNSVYHPLQ 120 QAEEENQLHD NVESNEMLRN NSSSETDSDS SSGSDSDSEV GKYFYPQIEQ LEMAKQPEPG 180 MKFQTLEDAH RFYNTYALLT GFEAKRGTNY MRKKFHLICN RSGKSRATPD LQRKRKRKSI 240 EKTNCQAKVI VKLTKGQWEF TTVRNEHNHP LCPSASLTKF YLSHKHISTE ERSFLKVLQR 300 TRIPPNKVMK IFRRMRGSFG SIPFKKKDGT NLLCAEQHRK ENSDVGRMLM YFKEKELQDP 360 SFQCMKQTDE DNIVRSVFWT DARSRMDYEI FGDFLLFDTT YTTDRHNMLF APIIGLNNHG 420 RTLLLGCALL HDESTETYKW MFETLLHVME DKMPVSIITN QDEAMAKAIG EVMPQVRHWL 480 CKWDVLEKAQ QNISAFIAES GNIKADLDSL VDNSLTEKEF EEGWDALIER YGASENEYLQ 540 ILWQRRKNWV PVYFREDFYP FVQSHGCDKG MNLLFNDYVL SIDRIEKFIE RYEEIYKNIT 600 KTDEEDRLQT GTVPSCFSLQ PIEKHAADIY TRQIFLKVQR ELLHSTAFNV QEVQRGAVYR 660 LNKVFNYENP EFDRNNFEVQ VESGTNAFKC QCAKFTRDGV LCCHIFRLFT QFGINQIPEQ 720 YIVPRWTEKF REEKEKQYKE KCSEQMDTTM RYTNFMTKMA DLGKTICSDG AKYDAFMLEV 780 DKIQENFATA QK

Sequence ? help Back to Top

Protein Sequence Length: 792 aa Download sequence

FVMGDMVTEL DEAGVRNAEN STEQREAYNV VDDEGSPVPL LMLPSGKEPV GNQSMTEGRL  60
QPAGDNYQEP VGKQSMTEGT LQPAGDNDQD PSSDSVEKNT EGLLADGQDQ QTNSVYHPLQ  120
QAEEENQLHD NVESNEMLRN NSSSETDSDS SSGSDSDSEV GKYFYPQIEQ LEMAKQPEPG  180
MKFQTLEDAH RFYNTYALLT GFEAKRGTNY MRKKFHLICN RSGKSRATPD LQRKRKRKSI  240
EKTNCQAKVI VKLTKGQWEF TTVRNEHNHP LCPSASLTKF YLSHKHISTE ERSFLKVLQR  300
TRIPPNKVMK IFRRMRGSFG SIPFKKKDGT NLLCAEQHRK ENSDVGRMLM YFKEKELQDP  360
SFQCMKQTDE DNIVRSVFWT DARSRMDYEI FGDFLLFDTT YTTDRHNMLF APIIGLNNHG  420
RTLLLGCALL HDESTETYKW MFETLLHVME DKMPVSIITN QDEAMAKAIG EVMPQVRHWL  480
CKWDVLEKAQ QNISAFIAES GNIKADLDSL VDNSLTEKEF EEGWDALIER YGASENEYLQ  540
ILWQRRKNWV PVYFREDFYP FVQSHGCDKG MNLLFNDYVL SIDRIEKFIE RYEEIYKNIT  600
KTDEEDRLQT GTVPSCFSLQ PIEKHAADIY TRQIFLKVQR ELLHSTAFNV QEVQRGAVYR  660
LNKVFNYENP EFDRNNFEVQ VESGTNAFKC QCAKFTRDGV LCCHIFRLFT QFGINQIPEQ  720
YIVPRWTEKF REEKEKQYKE KCSEQMDTTM RYTNFMTKMA DLGKTICSDG AKYDAFMLEV  780
DKIQENFATA QK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	233	238	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-79	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG011790.3