PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG011860.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 172aa    MW: 19685.1 Da    PI: 9.5535
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG011860.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.72.4e-14493390
                      EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-....TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                B3  3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvlt....kGWkeFvkangLkegDfvvFkldgrsef 90
                       + +++ +l+ g lv+ k++a++h  + ++++ ++l + +++++W+ +l++  ++g+++l+    +GW  Fv++n+L+egD++ F++++++++
  TRIDC5BG011860.5  4 VTAMNEKNLSDGFLVIRKEYAANHL-P-HQDQIIKLCHpQNSKTWDANLKV-ITDGACILSciifSGWPCFVRDNKLQEGDICAFEMSKSDGG 93
                      566799999************8884.3.46678999994556*******65.33334444445559********************8875444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
QFYVTAMNEK NLSDGFLVIR KEYAANHLPH QDQIIKLCHP QNSKTWDANL KVITDGACIL  60
SCIIFSGWPC FVRDNKLQEG DICAFEMSKS DGGVAIIVYH LKPASRKKMK VTRTDTGYVV  120
TRCTELTWQQ KRKIKERLLV IQPETKIFVS IMPSCRAKLV SCARSMQFPL SW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18000.18e-07B3 family protein