PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012000.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 170aa    MW: 20081.4 Da    PI: 8.4874
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012000.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.24.1e-15281061498
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       + l +p kf+e+++g    s  ++le ++g+ ++++    +  +++vl++GW  Fv+  +Lk+g f+vF+++g+s f  +v +f+
  TRIDC5BG012000.2  28 QALAIPQKFVENFKGH--ISEVIKLEAPDGNIYNIQA--VRDLNKIVLGSGWGVFVSFYKLKVGYFLVFRYIGDSHF--KVLIFD 106
                       6799******998776..6779***************..99999*****************************9999..887775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MIKITVMWMI PRSIFSSAWL AISQKKWQAL AIPQKFVENF KGHISEVIKL EAPDGNIYNI  60
QAVRDLNKIV LGSGWGVFVS FYKLKVGYFL VFRYIGDSHF KVLIFDFGTC CEKEVFHVLM  120
NCDPNAQEKE SNSESHRRCE LCDVHFYWHH LDDRQKHFLR LMVGDFRREM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-16B3 family protein