PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012000.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 339aa    MW: 39339.8 Da    PI: 7.8016
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012000.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3451.9e-14361131598
                       -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        + +p kf+e+++g    s  ++le ++g+ ++++    +  +++vl++GW  Fv+  +Lk+g f+vF+++g+s f  +v +f+
  TRIDC5BG012000.3  36 KMAIPQKFVENFKGH--ISEVIKLEAPDGNIYNIQA--VRDLNKIVLGSGWGVFVSFYKLKVGYFLVFRYIGDSHF--KVLIFD 113
                       489******998776..6779***************..99999*****************************9999..887775 PP
2B3536.1e-171742541399
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       ++ +++p kf++++ g    s  ++le ++g+ +++k+  +k  +++vl+ GW  F+++ +Lke D +vF+++g+s f  +v +f+ 
  TRIDC5BG012000.3 174 RREMSIPQKFVNNFRGR--ISEVMKLEAPDGNIYNFKV--TKDLNKIVLRYGWAAFASDYELKEHDLLVFRYIGDSHF--KVLIFDP 254
                       4569*******888766..6779***************..**********************************9999..9999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MTSVMAPDQD YDQDNSHVDD TQKYFFKCMV GDFPEKMAIP QKFVENFKGH ISEVIKLEAP  60
DGNIYNIQAV RDLNKIVLGS GWGVFVSFYK LKVGYFLVFR YIGDSHFKVL IFDFGTCCEK  120
EVFHVLMNCD PNAQEKESNS ESHRRCELCD VHFYWHHLDD RQKHFLRLMV GDFRREMSIP  180
QKFVNNFRGR ISEVMKLEAP DGNIYNFKVT KDLNKIVLRY GWAAFASDYE LKEHDLLVFR  240
YIGDSHFKVL IFDPSGCEKQ SFHIVLNHAP NVPKTGISHD RSFIRETRRR DCGSHDNNSR  300
KTKKMTPVDS PSPRFEGVTS PEVTMNSCGL RKSPSLTMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.18e-20B3 family protein