PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012000.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 228aa    MW: 25754.1 Da    PI: 4.9886
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012000.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3331e-10521311494
                       T-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                B3  14 grlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                       g l + k++a+++    +e++ +tl +++  + W  +l    ++g+++l+ GW+ Fv  n+L+e D+++F+++++  e ++vv
  TRIDC5BG012000.4  52 GSLAICKDYAAKYLP--HEDQFITLCHPHKsNIWVDNL-KVITDGSCMLSVGWSCFVLHNELRESDICLFEVSKSdGEVTMVV 131
                       669999****99942..344568888977636776666.56777789************************887535444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MWPSEIAEPH YVLATGCNLT TAQKAEVDAL VKKVRPVIPF YITAMNKTSM PGSLAICKDY  60
AAKYLPHEDQ FITLCHPHKS NIWVDNLKVI TDGSCMLSVG WSCFVLHNEL RESDICLFEV  120
SKSDGEVTMV VHSLEGGHHL QGKKPESQNK CTYPVKVEVT EEEDSDKEYA ESNYYYSRYA  180
YDLTGEEQEE IFRSALIQQG NPVYVAVLQE NHVSSRNNLL DLSQRPCG