PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012000.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 218aa    MW: 25418.7 Da    PI: 6.2808
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012000.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.15.6e-171192091099
                       HHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS
                B3  10 vlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97 
                       ++++++l++p++ a++h  +  +s ++ l    + ++W v++ y  +s +    +  + W +Fv++ngL eg ++vF+l++   e++++v+vf
  TRIDC5BG012000.8 119 SSRNNLLTFPRDLAAKHLAE--RSHDILLLRpNRREKWCVRYYY--HSMMriqGFSYSSWTKFVSDNGLHEGHVCVFELMKGvCEATMMVHVF 207
                       3455889**********433..34455555527779******44..333323445668**********************888********** PP

                       -S CS
                B3  98 rk 99 
                       rk
  TRIDC5BG012000.8 208 RK 209
                       96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MLSVGWSCFV LHNELRESDI CLFEVSKSDG EVTMVVHSLE GGHHLQGKKP ESQNKCTYPV  60
KVEVTEEEDS DKEYAESNYY YSRYAYDLTG EEQEEIFRSA LIQQGNPVYV AVLQENHVSS  120
RNNLLTFPRD LAAKHLAERS HDILLLRPNR REKWCVRYYY HSMMRIQGFS YSSWTKFVSD  180
NGLHEGHVCV FELMKGVCEA TMMVHVFRKF NGRFVLLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-08B3 family protein