PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012020.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 483aa    MW: 55028.9 Da    PI: 9.2747
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.41.7e-1517961499
                      T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      + + +p kf++++ g    sk ++le ++g+++++++  ++  ++++l++GW  F++a +Lke D +vF+++g+s f  +v +f+ 
  TRIDC5BG012020.1 17 HEMNIPEKFVNNFRGR--ISKVMKLEAPDGNVYNIQV--TNDLNKITLRSGWAAFASAYELKEHDLLVFSYTGNSHF--KVLIFDP 96
                      5699******888766..7899***************..**********************************9999..9999885 PP
2B337.73.5e-12218301994
                       HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                        +l sg lv+ k++a+++     e++ +tl + ++++ W  +l+++  + + +l++GW++F+  n+L+e D++vF+++++  e ++vv
  TRIDC5BG012020.1 218 TSL-SGSLVICKDYAAKYLPH--EDQFITLCHpRKSNIWLDNLKVTTDG-SGMLSAGWSSFALHNELRESDVCVFEVSKSaGEMTMVV 301
                       334.466***********423..344677777477799*9999654444.458***********************887544444444 PP
3B349.86.4e-163874741199
                       HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                        k+++l++p kfa++h ++++++  l l+  ++++W  ++ y   ++++   + W +F ++n+L+eg ++vF+l++  s++ + v+vf k
  TRIDC5BG012020.1 387 IKNNLLTFPEKFAAKH-LVERSHEILLLRPNRSETWCARYYYHPEKQGFS-YSSWTKFIRDNKLREGHVCVFELIKGvSKAMMIVHVFTK 474
                       6899***********9.4555555667777899*******9999998875.569*********************888***999999965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 483 aa     Download sequence    
DDRQKHFLRF MVGDFCHEMN IPEKFVNNFR GRISKVMKLE APDGNVYNIQ VTNDLNKITL  60
RSGWAAFASA YELKEHDLLV FSYTGNSHFK VLIFDPSGCE KELFRIVMNH TPNVQKRGIS  120
HDQLFLKETR RRDGGSRDNN PRKTKKMTLL DSPSPKSAEG VTSPEDTMKS GSPPETTEPR  180
YVLATGCNLT TAQKAQIDAL VKKVRPVIPF YITAMNKTSL SGSLVICKDY AAKYLPHEDQ  240
FITLCHPRKS NIWLDNLKVT TDGSGMLSAG WSSFALHNEL RESDVCVFEV SKSAGEMTMV  300
VHSLEGGHHL RGKEPESQNK CDYPVKGKAI KEAESDHKHA ESKSNYYYSK YAKGLTSEEL  360
EEIFRSALIQ QGNVVYVTIL GKNQVKIKNN LLTFPEKFAA KHLVERSHEI LLLRPNRSET  420
WCARYYYHPE KQGFSYSSWT KFIRDNKLRE GHVCVFELIK GVSKAMMIVH VFTKVDGRFV  480
LLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-18B3 family protein