PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012020.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 257aa    MW: 29355.6 Da    PI: 8.7945
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012020.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.53e-1016753694
                       EEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                 B3 36 ltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94
                       +tl + ++++ W  +l+++   g+ +l++GW++F+  n+L+e D++vF+++++  e ++vv
  TRIDC5BG012020.10 16 ITLCHpRKSNIWLDNLKVTTD-GSGMLSAGWSSFALHNELRESDVCVFEVSKSaGEMTMVV 75
                       555553555777777744333.4458***********************887544444444 PP
2B352.68.6e-171612481199
                        HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                 B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                         k+++l++p kfa++h ++++++  l l+  ++++W  ++ y  k +++   + W +Fv++n+L+ g ++vF+l++  s++++ v+vf k
  TRIDC5BG012020.10 161 IKNNLLTFPGKFAAKH-LVERSHDILLLRPNRSETWCARYYYHPKEQGFS-YSSWTKFVRDNKLCKGHVCVFELMKGvSKATMIVHVFTK 248
                        6899***********9.4555555566666889*******9999998875.569*********************888*********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
CKDYAAKYLP HEDQFITLCH PRKSNIWLDN LKVTTDGSGM LSAGWSSFAL HNELRESDVC  60
VFEVSKSAGE MTMVVHSLEG GHHLRGKEPE SQNKCDYPVK GKAIKEAESD HKHAESKSNY  120
YYSKYAKGLT GEELEEIFRS ALIQQGNVVY VTILGKNQVR IKNNLLTFPG KFAAKHLVER  180
SHDILLLRPN RSETWCARYY YHPKEQGFSY SSWTKFVRDN KLCKGHVCVF ELMKGVSKAT  240
MIVHVFTKVD GRFVLLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-06B3 family protein