PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012020.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 247aa    MW: 28924.1 Da    PI: 7.9454
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012020.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3482.3e-15841651098
                        HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                 B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        ++++  + +p kf+++++g+   s  ++le ++g+ ++v+    k  +++vl++GW  Fv+  +Lk+g f+vF+++g+s f  +v +f+
  TRIDC5BG012020.12  84 NFQE-KMAIPQKFVQNFKGQ--ISEVIKLEAPDGNIYDVQA--IKDLNKIVLASGWGVFVSFYELKAGYFLVFRYIGNSHF--KVLIFD 165
                        4444.499******888888..7779***************..999999****************************9999..887775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MYALLLWAWA SLALWLLLCR STGSWQRILI TFVMAPDQDH EQGNRSGHSI SSKSFQRCEG  60
CDAHYYWCHM DDTQKYFFKC MVGNFQEKMA IPQKFVQNFK GQISEVIKLE APDGNIYDVQ  120
AIKDLNKIVL ASGWGVFVSF YELKAGYFLV FRYIGNSHFK VLIFDFGSCC EKEVFHVLMK  180
CGPNAQEKDT RLDRSLLSGR RYQNGGSSNG ESHRRCEHCD VHFYWHHMDD RQKHFLRLMV  240
GDFRHEM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-17B3 family protein