PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012020.14
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 210aa    MW: 24124.3 Da    PI: 9.3115
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012020.14genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.76.7e-16831631399
                        TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        ++ + +p kf++++ g    +k ++le ++g+++++++  ++  ++++l++GW  F++a +Lke D +vF+++g+s f  +v +f+ 
  TRIDC5BG012020.14  83 RHEMNIPEKFVNNFRGR--IPKVMKLEAPDGNVYNIQV--TNDLNKITLRSGWAAFASACELKEHDLLVFSYTGNSHF--KVLIFDP 163
                        5679*******888766..7789***************..**********************************9999..9999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MGGICQLLRT KSGLLPGLQC GPNAQEKDTR LDRSLLSGRR YQNGGSSNGE SHRRCEHCDV  60
HFYWHHMDDR QKHFLRLMVG DFRHEMNIPE KFVNNFRGRI PKVMKLEAPD GNVYNIQVTN  120
DLNKITLRSG WAAFASACEL KEHDLLVFSY TGNSHFKVLI FDPSGCEKQL FRIVMNPAPN  180
VQENGISHDQ LFQKETKRRD GGSRDNNPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-19B3 family protein