PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012020.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 354aa    MW: 40984.5 Da    PI: 8.4234
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012020.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.92e-14511321098
                       HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       ++++  l +p kf+++++g+   s  ++le ++g+ ++v+    k  +++vl++GW  Fv+  +Lk+g  +vF+++g+s f  +v +f+
  TRIDC5BG012020.4  51 NFQE-KLAIPQKFVQNFKGQ--ISEVIKLEAPDGNIYNVQA--IKDLNKIVLGSGWGVFVRFYELKAGYLLVFRYIGDSHF--KVLIFD 132
                       4444.499******888888..7779***************..999999****************************9999..887775 PP
2B349.29.5e-162122911499
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       + + +p kf++++ g    sk ++le ++g+++++++  ++  ++++l++GW  F++a +Lke D +vF+++g+s f  +v +f+ 
  TRIDC5BG012020.4 212 HEMNIPEKFVNNFRGR--ISKVMKLEAPDGNVYNIQV--TNDLNKITLRSGWAAFASAYELKEHDLLVFSYTGNSHF--KVLIFDP 291
                       5699******888766..7899***************..**********************************9999..9999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MAPDQDHEQG NRSGHSISSK SFQRCEGCDA HYYWCHMDDT QKYFFKCMVG NFQEKLAIPQ  60
KFVQNFKGQI SEVIKLEAPD GNIYNVQAIK DLNKIVLGSG WGVFVRFYEL KAGYLLVFRY  120
IGDSHFKVLI FDFASCCEKE VFHVLMNCGP NAQEKDTHLE RSLLGERRCQ NGGSSNSESH  180
RRCEHCNVHF YWHHMDDRQK HFLRFMVGDF CHEMNIPEKF VNNFRGRISK VMKLEAPDGN  240
VYNIQVTNDL NKITLRSGWA AFASAYELKE HDLLVFSYTG NSHFKVLIFD PSGCEKELFR  300
IVMNHTPNVQ KRGISHDQLF LKETRRRDGG SRDNNPRKTK KMTLLDSPSP KSGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.18e-19B3 family protein