PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG012020.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 361aa MW: 41615.5 Da PI: 8.4762

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG012020.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.9	4.8e-15	67	148	10	98
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++++ l +p kf+++++g+ s ++le ++g+ ++v+ k +++vl++GW Fv+ +Lk+g f+vF+++g+s f +v +f+ TRIDC5BG012020.5 67 NFQE-KLAIPQKFVQNFKGQ--ISEVIKLEAPDGNIYDVQA--IKDLNKIVLASGWGVFVSFYELKAGYFLVFRYIGNSHF--KVLIFD 148 4444.499****888888..7779***********..999999**************************9999..887775 PP
2	B3	48.1	2.1e-15	227	307	13	99
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++ + +p kf++++ g +k ++le ++g+++++++ ++ ++++l++GW F++a +Lke D +vF+++g+s f +v +f+ TRIDC5BG012020.5 227 RHEMNIPEKFVNNFRGR--IPKVMKLEAPDGNVYNIQV--TNDLNKITLRSGWAAFASACELKEHDLLVFSYTGNSHF--KVLIFDP 307 5679*****888766..7789***********..********************************9999..9999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
SAEVLALGKA FLVIFIMAPD QDHEQGNRSG HSISSKSFQR CEGCDAHYYW CHMDDTQKYF 60 FKCMVGNFQE KLAIPQKFVQ NFKGQISEVI KLEAPDGNIY DVQAIKDLNK IVLASGWGVF 120 VSFYELKAGY FLVFRYIGNS HFKVLIFDFG SCCEKEVFHV LMKCGPNAQE KDTRLDRSLL 180 SGRRYQNGGS SNGESHRRCE HCDVHFYWHH MDDRQKHFLR LMVGDFRHEM NIPEKFVNNF 240 RGRIPKVMKL EAPDGNVYNI QVTNDLNKIT LRSGWAAFAS ACELKEHDLL VFSYTGNSHF 300 KVLIFDPSGC EKQLFRIVMN PAPNVQENGI SHDQLFQKET KRRDGGSRDN NPRKTKKMTP 360 L

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

SAEVLALGKA FLVIFIMAPD QDHEQGNRSG HSISSKSFQR CEGCDAHYYW CHMDDTQKYF  60
FKCMVGNFQE KLAIPQKFVQ NFKGQISEVI KLEAPDGNIY DVQAIKDLNK IVLASGWGVF  120
VSFYELKAGY FLVFRYIGNS HFKVLIFDFG SCCEKEVFHV LMKCGPNAQE KDTRLDRSLL  180
SGRRYQNGGS SNGESHRRCE HCDVHFYWHH MDDRQKHFLR LMVGDFRHEM NIPEKFVNNF  240
RGRIPKVMKL EAPDGNVYNI QVTNDLNKIT LRSGWAAFAS ACELKEHDLL VFSYTGNSHF  300
KVLIFDPSGC EKQLFRIVMN PAPNVQENGI SHDQLFQKET KRRDGGSRDN NPRKTKKMTP  360
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	4e-18	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG012020.5