PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012020.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 260aa    MW: 29864.2 Da    PI: 8.5503
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012020.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.86.1e-112781794
                      E--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                B3 17 vlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94
                      v+ k++a+++     e++ +tl + ++++ W  +l+++  + + +l++GW++F+  n+L+e D++vF+++++  e ++vv
  TRIDC5BG012020.8  2 VICKDYAAKYLPH--EDQFITLCHpRKSNIWLDNLKVTTDG-SGMLSAGWSSFALHNELRESDVCVFEVSKSaGEMTMVV 78
                      6888899888422..34457777746779999888654444.458***********************887544444444 PP
2B351.32e-161642511199
                       HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                        k+++l++p kfa++h ++++++  l l+  ++++W  ++ y   ++++   + W +F ++n+L+eg ++vF+l++  s++ + v+vf k
  TRIDC5BG012020.8 164 IKNNLLTFPEKFAAKH-LVERSHEILLLRPNRSETWCARYYYHPEKQGFS-YSSWTKFIRDNKLREGHVCVFELIKGvSKAMMIVHVFTK 251
                       6899***********9.4555555667777899*******9999998875.569*********************888***999999975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
QVICKDYAAK YLPHEDQFIT LCHPRKSNIW LDNLKVTTDG SGMLSAGWSS FALHNELRES  60
DVCVFEVSKS AGEMTMVVHS LEGGHHLRGK EPESQNKCDY PVKGKAIKEA ESDHKHAESK  120
SNYYYSKYAK GLTSEELEEI FRSALIQQGN VVYVTILGKN QVKIKNNLLT FPEKFAAKHL  180
VERSHEILLL RPNRSETWCA RYYYHPEKQG FSYSSWTKFI RDNKLREGHV CVFELIKGVS  240
KAMMIVHVFT KVDGRFVLLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-06B3 family protein