PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012020.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 259aa    MW: 29539.8 Da    PI: 8.6294
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012020.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.57.5e-111771794
                      E--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                B3 17 vlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94
                      v+ k++a+++    +e++ +tl + ++++ W  +l+++  + + +l++GW++F+  n+L+e D++vF+++++  e ++vv
  TRIDC5BG012020.9  1 VICKDYAAKYLP--HEDQFITLCHpRKSNIWLDNLKVTTDG-SGMLSAGWSSFALHNELRESDVCVFEVSKSaGEMTMVV 77
                      578888888842..233457777746779998888654443.458***********************887544444444 PP
2B352.58.7e-171632501199
                       HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                        k+++l++p kfa++h ++++++  l l+  ++++W  ++ y  k +++   + W +Fv++n+L+ g ++vF+l++  s++++ v+vf k
  TRIDC5BG012020.9 163 IKNNLLTFPGKFAAKH-LVERSHDILLLRPNRSETWCARYYYHPKEQGFS-YSSWTKFVRDNKLCKGHVCVFELMKGvSKATMIVHVFTK 250
                       6899***********9.4555555566666889*******9999998875.569*********************888*********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
VICKDYAAKY LPHEDQFITL CHPRKSNIWL DNLKVTTDGS GMLSAGWSSF ALHNELRESD  60
VCVFEVSKSA GEMTMVVHSL EGGHHLQGKE PESQNKCDYP VKGKAIKEAE SDHKHAESKS  120
NYYYSKYAKG LTGEELEEIF RSALIQQGNV VYVTILGKNQ VRIKNNLLTF PGKFAAKHLV  180
ERSHDILLLR PNRSETWCAR YYYHPKEQGF SYSSWTKFVR DNKLCKGHVC VFELMKGVSK  240
ATMIVHVFTK VDGRFVLLD