PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012110.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 290aa    MW: 31606.2 Da    PI: 4.9441
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.3e-102202601055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR+riN+++ +L++l+P+      +K++ +++Le+Av+++k Lq
  TRIDC5BG012110.1 220 RKRRKRINERLKTLQTLVPNG-----TKVDMSTMLEEAVQHVKFLQ 260
                       9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEAGGLISEA GWTMFDFPPQ GEESDIMAQL LGTFPSHAEE AQQDLPWYQA SHPSYYDSDV  60
HTSACSDSND GSFAVPSECM GYYLGDSSEA LGISSCTVPQ DLNLVQEQGA TEFLNMIPTI  120
SHDLFGKGES SCEGLDSVSA TNKRKHSVEE EINGQARGRK CARKAAPKRA KNAKQTEASC  180
CTSDNDSNAS QESADAGVTP KGKARAGRGA ATDPQSLYAR KRRKRINERL KTLQTLVPNG  240
TKVDMSTMLE EAVQHVKFLQ LQIKVLSSDE MWMYARIAYN GMNIGLDLNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-42bHLH family protein