PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG014120.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 718aa    MW: 79321.6 Da    PI: 5.6644
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG014120.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS352.66.1e-1083407121374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d + a++lL++++ +a pdgd +qRla++f+e+L+arla+++  + ++l +++ s    ++ l+a++l+  +  + k+
  TRIDC5BG014120.1 340 LRTLLIHCAQAVATDDRRSATELLKQIKLHARPDGDGTQRLAHCFAEGLQARLAGTGGLVHQSLMATRIS---AVDMLKAYQLYMAAICFKKV 429
                       6789***************************************************888888777777776...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s+l  N++I++a  g++++HiiD++i++G+QWp++l+ +++Rp+gpp++RiTg++ p++g   +e++eetg+rL+k+A+e++vpfe++++++ 
  TRIDC5BG014120.1 430 SFLFSNSTIYNASLGKKKIHIIDYGIQYGFQWPCFLRRISTRPGGPPNVRITGIDLPQPGfrPTERIEETGRRLKKYAHEFNVPFEYRAIATA 522
                       ***********************************************************9*****************************9999 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+l+ e+L+++p+E+l+Vn+ +q ++l+desv les+rd vLk +++++P+ ++++  + + +++ F++rf e l yysalfd l+++ pr
  TRIDC5BG014120.1 523 KMESLRKEDLKIDPDEVLIVNSLFQFKNLMDESVVLESPRDVVLKNIRKMRPHTFIHAIVNGSFSAPFFVTRFREVLFYYSALFDVLDTTTPR 615
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++e+r+ +E+ +lgr++ nv+aceg++r+er et+++W+ r ++aG+k +pl+ ++ + a+  +++++ + + ++ ++++l++gWk+r L+++
  TRIDC5BG014120.1 616 DNEQRMLIEQNILGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKLLPLNPEVIELARDKVKNCYHKDFVIDIDQHWLLQGWKGRILYAI 708
                       ********************************************************************889********************** PP

              GRAS 371 SaWr 374
                       S W+
  TRIDC5BG014120.1 709 STWT 712
                       ***5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 718 aa     Download sequence    
ADDPSLNLYL SDLIPGSPSE YLDLPPTPHH EQEHQKPSPD GHGGGVGGGG GDSPSSTPED  60
LVLPFISRIL MEEDIDDKFF YDFPDNPALI EAQQPFLEIL SDPSSNSTSD DSNNRAVSPC  120
SPSDASVGTA AQLPPTPAAV DSYDRFQFEP VDLDPAAFFG GGANSDLMSS AFLKGMQEAN  180
KFLPSQDKLV IDLEASSGQF FKGVEEGNKF LPREDKLVAG FNGHAAPAPA PVVLSVKKEE  240
AVDAVSANSG GGRGRKNPYH DDELEQEGGR SSKQSALGDD VSAREMFDRM LMPSDEMCIV  300
QMQNLRIAMQ EAVAKNDSGG GKGANGKGRG RRGGSDVVDL RTLLIHCAQA VATDDRRSAT  360
ELLKQIKLHA RPDGDGTQRL AHCFAEGLQA RLAGTGGLVH QSLMATRISA VDMLKAYQLY  420
MAAICFKKVS FLFSNSTIYN ASLGKKKIHI IDYGIQYGFQ WPCFLRRIST RPGGPPNVRI  480
TGIDLPQPGF RPTERIEETG RRLKKYAHEF NVPFEYRAIA TAKMESLRKE DLKIDPDEVL  540
IVNSLFQFKN LMDESVVLES PRDVVLKNIR KMRPHTFIHA IVNGSFSAPF FVTRFREVLF  600
YYSALFDVLD TTTPRDNEQR MLIEQNILGR AALNVIACEG TDRVERPETY KQWQVRNQRA  660
GLKLLPLNPE VIELARDKVK NCYHKDFVID IDQHWLLQGW KGRILYAIST WTANDASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-161GRAS family protein