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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC5BG014120.3 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | GRAS | ||||||||
| Protein Properties | Length: 448aa MW: 50907.1 Da PI: 9.6275 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 354.6 | 1.5e-108 | 55 | 427 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93
l++lL++cA+av+++d + a++lL++++ +a pdgd +qRla++f+e+L+arla+++ + ++l +++ s ++ l+a++l+ + + k+
TRIDC5BG014120.3 55 LRTLLIHCAQAVATDDRRSATELLKQIKLHARPDGDGTQRLAHCFAEGLQARLAGTGGLVHQSLMATRIS---AVDMLKAYQLYMAAICFKKV 144
6789***************************************************888888777777776...9******************* PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
s+l N++I++a g++++HiiD++i++G+QWp++l+ +++Rp+gpp++RiTg++ p++g +e++eetg+rL+k+A+e++vpfe++++++
TRIDC5BG014120.3 145 SFLFSNSTIYNASLGKKKIHIIDYGIQYGFQWPCFLRRISTRPGGPPNVRITGIDLPQPGfrPTERIEETGRRLKKYAHEFNVPFEYRAIATA 237
***********************************************************9*****************************9999 PP
GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
++e+l+ e+L+++p+E+l+Vn+ +q ++l+desv les+rd vLk +++++P+ ++++ + + +++ F++rf e l yysalfd l+++ pr
TRIDC5BG014120.3 238 KMESLRKEDLKIDPDEVLIVNSLFQFKNLMDESVVLESPRDVVLKNIRKMRPHTFIHAIVNGSFSAPFFVTRFREVLFYYSALFDVLDTTTPR 330
********************************************************************************************* PP
GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
++e+r+ +E+ +lgr++ nv+aceg++r+er et+++W+ r ++aG+k +pl+ ++ + a+ +++++ + + ++ ++++l++gWk+r L+++
TRIDC5BG014120.3 331 DNEQRMLIEQNILGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKLLPLNPEVIELARDKVKNCYHKDFVIDIDQHWLLQGWKGRILYAI 423
********************************************************************889********************** PP
GRAS 371 SaWr 374
S W+
TRIDC5BG014120.3 424 STWT 427
***6 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 448 aa Download sequence |
MFDRMLMPSD EMCIVQMQNL RIAMQEAVAK NDSGGGKGAN GKGRGRRGGS DVVDLRTLLI 60 HCAQAVATDD RRSATELLKQ IKLHARPDGD GTQRLAHCFA EGLQARLAGT GGLVHQSLMA 120 TRISAVDMLK AYQLYMAAIC FKKVSFLFSN STIYNASLGK KKIHIIDYGI QYGFQWPCFL 180 RRISTRPGGP PNVRITGIDL PQPGFRPTER IEETGRRLKK YAHEFNVPFE YRAIATAKME 240 SLRKEDLKID PDEVLIVNSL FQFKNLMDES VVLESPRDVV LKNIRKMRPH TFIHAIVNGS 300 FSAPFFVTRF REVLFYYSAL FDVLDTTTPR DNEQRMLIEQ NILGRAALNV IACEGTDRVE 360 RPETYKQWQV RNQRAGLKLL PLNPEVIELA RDKVKNCYHK DFVIDIDQHW LLQGWKGRIL 420 YAISTWTAND VILLIGPICA MQVMREMG |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G37650.1 | 1e-157 | GRAS family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC5BG014120.3 |




