PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG014590.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 206aa    MW: 23280.3 Da    PI: 9.9322
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG014590.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.27.9e-183277148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rgr+T+ E+ l++++++++G++ W++Iar+++ gRt++++k++w++++
  TRIDC5BG014590.4 32 RGRMTPHEERLILELHARWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 77
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MDRAGGHATG LNRTGKSCRL RWVNYLHPGL KRGRMTPHEE RLILELHARW GNRWSRIARK  60
LPGRTDNEIK NYWRTHMRKK AQERKRNVSP SSSSSSVTYQ SIQPQTPSIM GIGEQELHGG  120
SSCITSILKG TPADMDGYLM DQIWMEIEAP SGVNFHDGKD NSYSSPSGPL LPSPMWDYYS  180
PEAGWKMDEI KMAPQVSYSK GIGPSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.32e-54MYB_related family protein