PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG014590.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 258aa    MW: 29487.8 Da    PI: 10.5354
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG014590.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.4e-1758105148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g+WT++Ed +lv+ v+++G ++W+ Ia+  g++Rt+k+c++rw +yl
  TRIDC5BG014590.6  58 KGPWTEQEDMQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYL 105
                       79********************************************97 PP
2Myb_DNA-binding55.71.1e-17111156148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rgr+T+ E+ l++++++++G++ W++Iar+++ gRt++++k++w++++
  TRIDC5BG014590.6 111 RGRMTPHEERLILELHARWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 156
                       89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
KVIRPLGNKG QLPSLPTSFI LLLPNRLEFI KDLVLKLEPT STQRKKSKKT GSQPIQGKGP  60
WTEQEDMQLV CTVRLFGERR WDFIAKVSGL NRTGKSCRLR WVNYLHPGLK RGRMTPHEER  120
LILELHARWG NRWSRIARKL PGRTDNEIKN YWRTHMRKKA QERKRNVSPS SSSSSVTYQS  180
IQPQTPSIMG IGEQELHGGS SCITSILKGT PADMDGYLMD QIWMEIEAPS GVNFHDGKDN  240
SYSSPSGPLL PSPMWDYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.32e-69MYB family protein