PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG015420.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 212aa    MW: 24262 Da    PI: 6.88
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG015420.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.46.9e-182871146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++
  TRIDC5BG015420.2 28 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 71
                      89********************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MHAGAGLKRT GKSCRLRWLN YLRPDVKRGN FTADEQLLIL DLHSRWGNRW SKIAQHLPGR  60
TDNEIKNYWR TRVQKHAKQL NCDANSSKFK DAMKYLWMPR LADHHLQQAS TVGDHLVPGL  120
PTSYMESSGM VTSSSDSFAS ESYDGARCTN ASVGEMIQGG DWVQEQNQGF WPESNQTFQL  180
QDSELSGWVQ GFSESESLAE NFWSLEDIWK MQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.14e-57MYB family protein