PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG015420.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 241aa MW: 27479.5 Da PI: 6.6261

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG015420.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.4	3.2e-18	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd+ lv++++ +G g+W++ ar g++Rt+k+c++rw++yl TRIDC5BG015420.3 13 RGPWTVEEDLTLVNYIADHGDGRWNSLARAAGLKRTGKSCRLRWLNYL 60 89********************************************97 PP
2	Myb_DNA-binding	56.1	8.5e-18	66	109	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC5BG015420.3 66 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 109 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
TTCVFSLSLE IRRGPWTVEE DLTLVNYIAD HGDGRWNSLA RAAGLKRTGK SCRLRWLNYL 60 RPDVKRGNFT ADEQLLILDL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR VQKHAKQLNC 120 DANSSKFKDA MKYLWMPRLA DHHLQQASTV GDHLVPGLPT SYMESSGMVT SSSDSFASES 180 YDGARCTNAS VGEMIQGGDW VQEQNQGFWP ESNQTFQLQD SELSGWVQGF SESESLAENF 240 W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G48000.1	2e-78	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG015420.3