PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG015420.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 259aa    MW: 29358.5 Da    PI: 6.5113
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG015420.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.33.7e-184188148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd+ lv++++ +G g+W++ ar  g++Rt+k+c++rw++yl
  TRIDC5BG015420.4 41 RGPWTVEEDLTLVNYIADHGDGRWNSLARAAGLKRTGKSCRLRWLNYL 88
                      89********************************************97 PP
2Myb_DNA-binding55.99.5e-1894137146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++
  TRIDC5BG015420.4  94 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 137
                       89********************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MASWSSSSTQ RSSGTTMPCS VVKLDDDLLR HEEEAAEEIR RGPWTVEEDL TLVNYIADHG  60
DGRWNSLARA AGLKRTGKSC RLRWLNYLRP DVKRGNFTAD EQLLILDLHS RWGNRWSKIA  120
QHLPGRTDNE IKNYWRTRVQ KHAKQLNCDA NSSKFKDAMK YLWMPRLADH HLQQASTVGD  180
HLVPGLPTSY MESSGMVTSS SDSFASESYD GARCTNASVG EMIQGGDWVQ EQNQGFWPES  240
NQTFQLQDSE LSGWVQGFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.15e-77MYB family protein