PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG015420.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 179aa MW: 20845.6 Da PI: 9.431

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG015420.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.9e-18	19	66	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd+ lv++++ +G g+W++ ar g++Rt+k+c++rw++yl TRIDC5BG015420.5 19 RGPWTVEEDLTLVNYIADHGDGRWNSLARAAGLKRTGKSCRLRWLNYL 66 89********************************************97 PP
2	Myb_DNA-binding	56.8	5.1e-18	72	115	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC5BG015420.5 72 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 115 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
KLDDDLLRHE EEAAEEIRRG PWTVEEDLTL VNYIADHGDG RWNSLARAAG LKRTGKSCRL 60 RWLNYLRPDV KRGNFTADEQ LLILDLHSRW GNRWSKIAQH LPGRTDNEIK NYWRTRVQKH 120 AKQLNCDANS SKFKDAMKYL WMPRLADHHL QQASTVGDHL VPGLPTSYME SSVVWMGSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G48000.1	7e-78	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG015420.5