PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG015910.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 595aa    MW: 66119.9 Da    PI: 7.2618
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG015910.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.33.7e-151832661499
                       T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  14 grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                       + +++pk++a+ h   ++es t+tl++  ++++W  ++   kk+ ++ lt+ W +Fv++n++ egD+++F   +  + f ++v+++rk
  TRIDC5BG015910.3 183 SYVTIPKEYAAVHF--PHESATITLRSpGKNKKWHPRF--YKKGTMIKLTGSWIHFVRDNDVHEGDICIFVPAKGgKPFMFTVHLLRK 266
                       4589******9997..45788******5566*******..9999***************************77655999999999987 PP
2B352.77.7e-17323418399
                       EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       +++t+s+ ++++ + l+k++a+eh   +++++tl+++   g+ W++++ +  rk+++r +l +GW++F ++n L+ gD+++F+l+++ +e + 
  TRIDC5BG015910.3 323 SIMTKSNLGSRH-MELSKRYAAEHL--PHRNVTLMFQY-MGKIWNINMLFhdRKYPKRWYLIGGWSKFISDNSLRLGDICLFELKKDeKELTV 411
                       567777777777.***********5..34677888776.9********9999******99999**********************99899999 PP

                       EEEEE-S CS
                B3  93 vvkvfrk 99 
                        v+++rk
  TRIDC5BG015910.3 412 IVHLLRK 418
                       9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    
LFSVRCRRRA VGPSLTPPYP GAAEGAVPSS SMDAPLTEER RAARRVRRRV CSSGLPTSLN  60
HGESDNAQET STHSTEISSS DCYTQLSSES SDEGCENRSS GHRRKRRKTS VISSASEQSG  120
QDSPSACESL ESDDVQITPG KDYVLPQRCD LSDAEKNRVV ALIKEIKAKV TVFVAIMFRS  180
YSSYVTIPKE YAAVHFPHES ATITLRSPGK NKKWHPRFYK KGTMIKLTGS WIHFVRDNDV  240
HEGDICIFVP AKGGKPFMFT VHLLRKETTD SQTEVSHESS ECEDSHGQPP YILPYGARLS  300
PSQRNAVQKK VDSIQSEVPI YVSIMTKSNL GSRHMELSKR YAAEHLPHRN VTLMFQYMGK  360
IWNINMLFHD RKYPKRWYLI GGWSKFISDN SLRLGDICLF ELKKDEKELT VIVHLLRKES  420
IDHPSGGSPV LDSNYVRAST MIASTVRVGE EPDDEEETAS SGREEQGFHD EPIEHNHSEG  480
ASKAHMPTAP CSESNASGIS PSSEAREQAA GCSNKSFATE FPNKLSSTME HNRIIHTDRA  540
AASEVIGLSD YRIHNSCDSI DSQGGESLAV QQQSSPSPEI GNSVNRARMV LLYSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.18e-10B3 family protein