PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG015910.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 1082aa    MW: 117808 Da    PI: 7.1213
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG015910.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.18.5e-151832661499
                       T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  14 grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                       + +++pk++a+ h   ++es t+tl++  ++++W  ++   kk+ ++ lt+ W +Fv++n++ egD+++F   +  + f ++v+++rk
  TRIDC5BG015910.4 183 SYVTIPKEYAAVHF--PHESATITLRSpGKNKKWHPRF--YKKGTMIKLTGSWIHFVRDNDVHEGDICIFVPAKGgKPFMFTVHLLRK 266
                       4589******9997..45788******5566*******..9999***************************77655999999999987 PP
2B351.51.8e-16323418399
                       EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       +++t+s+ ++++ + l+k++a+eh   +++++tl+++   g+ W++++ +  rk+++r +l +GW++F ++n L+ gD+++F+l+++ +e + 
  TRIDC5BG015910.4 323 SIMTKSNLGSRH-MELSKRYAAEHL--PHRNVTLMFQY-MGKIWNINMLFhdRKYPKRWYLIGGWSKFISDNSLRLGDICLFELKKDeKELTV 411
                       567777777777.***********5..34677888776.9********9999******99999**********************99899999 PP

                       EEEEE-S CS
                B3  93 vvkvfrk 99 
                        v+++rk
  TRIDC5BG015910.4 412 IVHLLRK 418
                       9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1082 aa     Download sequence    
LFSVRCRRRA VGPSLTPPYP GAAEGAVPSS SMDAPLTEER RAARRVRRRV CSSGLPTSLN  60
HGESDNAQET STHSTEISSS DCYTQLSSES SDEGCENRSS GHRRKRRKTS VISSASEQSG  120
QDSPSACESL ESDDVQITPG KDYVLPQRCD LSDAEKNRVV ALIKEIKAKV TVFVAIMFRS  180
YSSYVTIPKE YAAVHFPHES ATITLRSPGK NKKWHPRFYK KGTMIKLTGS WIHFVRDNDV  240
HEGDICIFVP AKGGKPFMFT VHLLRKETTD SQTEVSHESS ECEDSHGQPP YILPYGARLS  300
PSQRNAVQKK VDSIQSEVPI YVSIMTKSNL GSRHMELSKR YAAEHLPHRN VTLMFQYMGK  360
IWNINMLFHD RKYPKRWYLI GGWSKFISDN SLRLGDICLF ELKKDEKELT VIVHLLRKES  420
IDHPSGGSPV LDSNYVRAST MIASTVRVGE EPDDEEETAS SGREEQGFHD EPIEHNHSEG  480
ASKAHMPTAP CSESNASGIS PSSEAREQAA GCSNKSFATE FPNKLSSTME HNRIIHTDRA  540
AASEVIGLSD YRIHNSCDSI DSQGGESLAV QQQSSPSPEI GNSVNRDSSS VTGQNGVALQ  600
SLVRVTGQQV GDAEKEVNAS GGENTLADLR HLEPQNAAAV PSQAALPMPK EKTDTQTNRS  660
AQPDVAQAQP PQGEVEQAGL SGVASPQPLQ PAQLAQGEAE QDLSGVALPS QPETRPSISG  720
FVKTRSNLET QSVQQSIAPV QFPQEQAGLS GVASAQPLVP EMRPSNPLSN IPLERAHPNR  780
GQSSRQPEVA AGPAQPAQLF PVPSMMFNHP PIGDEPLKNE LHRLRLHIDS LDKIYELKQS  840
QLQTECSQEI EKIKQKYDLL LEERDSVHLE QMKTLDGLLE KVVFHQSLAA DFRAKFISSS  900
AAQAKAYSRP IHQTPQASQQ APMRPPGVTS TSPPVAWSSA GRPVVPGGAQ PSQVDRPSTP  960
ASSQVPRPPL PSTPVVRPPI NPGNLVRTTG APMPRVPPRG SHGVPSASAP HLQRRLPPRA  1020
HSTAPANQRQ QQQQHATSVS PQSSHAVPPV SSSPLPPSSS QATHHGSSTR MDVDVVCLSD  1080
DE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.11e-09B3 family protein