PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG015910.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 1070aa    MW: 116506 Da    PI: 6.9099
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG015910.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.28.4e-151712541499
                       T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  14 grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                       + +++pk++a+ h   ++es t+tl++  ++++W  ++   kk+ ++ lt+ W +Fv++n++ egD+++F   +  + f ++v+++rk
  TRIDC5BG015910.5 171 SYVTIPKEYAAVHF--PHESATITLRSpGKNKKWHPRF--YKKGTMIKLTGSWIHFVRDNDVHEGDICIFVPAKGgKPFMFTVHLLRK 254
                       4589******9997..45788******5566*******..9999***************************77655999999999987 PP
2B351.61.8e-16311406399
                       EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       +++t+s+ ++++ + l+k++a+eh   +++++tl+++   g+ W++++ +  rk+++r +l +GW++F ++n L+ gD+++F+l+++ +e + 
  TRIDC5BG015910.5 311 SIMTKSNLGSRH-MELSKRYAAEHL--PHRNVTLMFQY-MGKIWNINMLFhdRKYPKRWYLIGGWSKFISDNSLRLGDICLFELKKDeKELTV 399
                       567777777777.***********5..34677888776.9********9999******99999**********************99899999 PP

                       EEEEE-S CS
                B3  93 vvkvfrk 99 
                        v+++rk
  TRIDC5BG015910.5 400 IVHLLRK 406
                       9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1070 aa     Download sequence    
MHQTPPYPGA AEGAVPSSSM DAPLTEERRA ARRVRRRVCS SGLPTSLNHG ESDNAQETST  60
HSTEISSSDC YTQLSSESSD EGCENRSSGH RRKRRKTSVI SSASEQSGQD SPSACESLES  120
DDVQITPGKD YVLPQRCDLS DAEKNRVVAL IKEIKAKVTV FVAIMFRSYS SYVTIPKEYA  180
AVHFPHESAT ITLRSPGKNK KWHPRFYKKG TMIKLTGSWI HFVRDNDVHE GDICIFVPAK  240
GGKPFMFTVH LLRKETTDSQ TEVSHESSEC EDSHGQPPYI LPYGARLSPS QRNAVQKKVD  300
SIQSEVPIYV SIMTKSNLGS RHMELSKRYA AEHLPHRNVT LMFQYMGKIW NINMLFHDRK  360
YPKRWYLIGG WSKFISDNSL RLGDICLFEL KKDEKELTVI VHLLRKESID HPSGGSPVLD  420
SNYVRASTMI ASTVRVGEEP DDEEETASSG REEQGFHDEP IEHNHSEGAS KAHMPTAPCS  480
ESNASGISPS SEAREQAAGC SNKSFATEFP NKLSSTMEHN RIIHTDRAAA SEVIGLSDYR  540
IHNSCDSIDS QGGESLAVQQ QSSPSPEIGN SVNRDSSSVT GQNGVALQSL VRVTGQQVGD  600
AEKEVNASGG ENTLADLRHL EPQNAAAVPS QAALPMPKEK TDTQTNRSAQ PDVAQAQPPQ  660
GEVEQAGLSG VASPQPLQPA QLAQGEAEQD LSGVALPSQP ETRPSISGFV KTRSNLETQS  720
VQQSIAPVQF PQEQAGLSGV ASAQPLVPEM RPSNPLSNIP LERAHPNRGQ SSRQPEVAAG  780
PAQPAQLFPV PSMMFNHPPI GDEPLKNELH RLRLHIDSLD KIYELKQSQL QTECSQEIEK  840
IKQKYDLLLE ERDSVHLEQM KTLDGLLEKV VFHQSLAADF RAKFISSSAA QAKAYSRPIH  900
QTPQASQQAP MRPPGVTSTS PPVAWSSAGR PVVPGGAQPS QVDRPSTPAS SQVPRPPLPS  960
TPVVRPPINP GNLVRTTGAP MPRVPPRGSH GVPSASAPHL QRRLPPRAHS TAPANQRQQQ  1020
QQHATSVSPQ SSHAVPPVSS SPLPPSSSQA THHGSSTRMD VDVVCLSDDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.12e-09B3 family protein