PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG015910.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 1040aa    MW: 113076 Da    PI: 6.6255
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG015910.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.28.1e-151672501499
                       T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  14 grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                       + +++pk++a+ h   ++es t+tl++  ++++W  ++   kk+ ++ lt+ W +Fv++n++ egD+++F   +  + f ++v+++rk
  TRIDC5BG015910.7 167 SYVTIPKEYAAVHF--PHESATITLRSpGKNKKWHPRF--YKKGTMIKLTGSWIHFVRDNDVHEGDICIFVPAKGgKPFMFTVHLLRK 250
                       4589******9997..45788******5566*******..9999***************************77655999999999987 PP
2B351.61.7e-16307402399
                       EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       +++t+s+ ++++ + l+k++a+eh   +++++tl+++   g+ W++++ +  rk+++r +l +GW++F ++n L+ gD+++F+l+++ +e + 
  TRIDC5BG015910.7 307 SIMTKSNLGSRH-MELSKRYAAEHL--PHRNVTLMFQY-MGKIWNINMLFhdRKYPKRWYLIGGWSKFISDNSLRLGDICLFELKKDeKELTV 395
                       567777777777.***********5..34677888776.9********9999******99999**********************99899999 PP

                       EEEEE-S CS
                B3  93 vvkvfrk 99 
                        v+++rk
  TRIDC5BG015910.7 396 IVHLLRK 402
                       9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1040 aa     Download sequence    
PPYPGAAEGA VPSSSMDAPL TEERRAARRV RRRVCSSGLP TSLNHGESDN AQETSTHSTE  60
ISSSDCYTQL SSESSDEGCE NRSSGHRRKR RKTSVISSAS EQSGQDSPSA CESLESDDVQ  120
ITPGKDYVLP QRCDLSDAEK NRVVALIKEI KAKVTVFVAI MFRSYSSYVT IPKEYAAVHF  180
PHESATITLR SPGKNKKWHP RFYKKGTMIK LTGSWIHFVR DNDVHEGDIC IFVPAKGGKP  240
FMFTVHLLRK ETTDSQTEVS HESSECEDSH GQPPYILPYG ARLSPSQRNA VQKKVDSIQS  300
EVPIYVSIMT KSNLGSRHME LSKRYAAEHL PHRNVTLMFQ YMGKIWNINM LFHDRKYPKR  360
WYLIGGWSKF ISDNSLRLGD ICLFELKKDE KELTVIVHLL RKESIDHPSG GSPVLDSNYV  420
RASTMIASTV RVGEEPDDEE ETASSGREEQ GFHDEPIEHN HSEGASKAHM PTAPCSESNA  480
SGISPSSEAR EQAAGCSNKS FATEFPNKLS STMEHNRIIH TDRAAASEVI GLSDYRIHNS  540
CDSIDSQGGE SLAVQQQSSP SPEIGNSVNR DSSSVTGQNG VALQSLVRVT GQQVGDAEKE  600
VNASGGENTL ADLRHLEPQN AAAVPSQAAL PMPKEKTDTQ TNRSAQPDVA QAQPPQGEVE  660
QAGLSGVASP QPLQPAQLAQ GEAEQDLSGV ALPSQPETRP SISGFVKTRS NLETQSVQQS  720
IAPVQFPQEQ AGLSGVASAQ PLVPEMRPSN PLSNIPLERA HPNRGQSSRQ PEVAAGPAQP  780
AQLFPVPSMM FNHPPIGDEP LKNELHRLRL HIDSLDKIYE LKQSQLQTEC SQEIEKIKQK  840
YDLLLEERDS VHLEQMKTLD GLLEKVVFHQ SLAADFRAKF ISSSAAQAKA YSRPIHQTPQ  900
ASQQAPMRPP GVTSTSPPVA WSSAGRPVVP GGAQPSQVDR PSTPASSQNN RCSHASSSTT  960
WKPWSSECIR SSSSAQIAAS GAFHGPCKSE AAAAAACHIC KPAVFTCSSP CELITLAAVK  1020
FTSNSPWFVD SDGCGCGMPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.11e-09B3 family protein