PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG016050.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 691aa    MW: 80791.4 Da    PI: 8.4994
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG016050.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.18.4e-2525119191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                       +fYn+YA e GFsvrks+ +    n+ i+ r+ vCs++g+re+++ k   ++++rr+r+ tr+gC akl++++++ +++w v+++  eH+H+l
  TRIDC5BG016050.1  25 EFYNKYALEKGFSVRKSYVEWDGSNKYIILRKIVCSRQGFREDKHMKrkmEDRKRRPRSLTRVGCSAKLVITRQEeTDRWFVKDFIDEHSHPL 117
                       6******************************************999888889999*******************99****************9 PP

              FAR1  90 ap 91 
                       ap
  TRIDC5BG016050.1 118 AP 119
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 691 aa     Download sequence    
ASDESMFKYV NVVSKMFDSE AEGYEFYNKY ALEKGFSVRK SYVEWDGSNK YIILRKIVCS  60
RQGFREDKHM KRKMEDRKRR PRSLTRVGCS AKLVITRQEE TDRWFVKDFI DEHSHPLAPR  120
DLSCLLRSHR RISDEQKAYI ADMEKCGIRK YRIMDILCFQ YGGFDKVGCI KRDIYNFCHA  180
NKQETISAGD AKTVIMHMMA RRERDVDFFF KYLVDEHGHL KGLFWADSQS QLDYEAFGDV  240
IVFDSTYRTN KYNLPFVPFV GLNHHRSTVL FGCGIISHDT SQAYEWMLRT FSDCMAQKHP  300
ISVITDGDLA MQRAIRVVWP DSNHRLCIWH IQQNIVRHLH DDDVKEEFRS FIYDTSSIEE  360
HEIKWIQFLQ RNKVTSEESW LHQMYQMRKL WCAPYLEGRC FLGLSSNQRS ESLNSMLRTH  420
LEGKMSLFEM LEHYECCLAS RRINEALHDV EALQSVPFTE ENALPLEKHA ATVFTPRVFK  480
MVLWSIDAVS KCQIREILDG SEDSTYVVSK QERMDKKFGV RIEEQGGLLH RVSCSCRKLE  540
CAGTPCSHIF YILGILKQTI MPDCCVPTRW TMNAKCAYAP TRKNQMYDYS LSLQRYRELR  600
NCSHAASFQA CHSDEDYHRL KMLLQAQHHG KQSSFELADS KESTNAQHNS IRFGPLMPHS  660
QKVDKVLDPV HVPGRGAPKK RLQAKTKKSR S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17681DRKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-99FAR1 family protein