PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG017510.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 394aa MW: 42646.6 Da PI: 7.3013

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG017510.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.3e-15	36	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+lv + + G g+W+ +ar g+ R++k+c++rw +yl TRIDC5BG017510.1 36 KGLWSPEEDERLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYL 83 678*******************************************97 PP
2	Myb_DNA-binding	51.6	2.1e-16	89	132	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l+v++++ lG++ W+ Ia++++ gRt++++k++w++ TRIDC5BG017510.1 89 RGAFSPQEEDLIVNLHAILGNR-WSQIAARLP-GRTDNEIKNFWNS 132 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
SGRAMRKPVE CPATKCSGGA APGNSNVAAA AAKLRKGLWS PEEDERLVAY MLRSGQGSWS 60 DVARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEDLI VNLHAILGNR WSQIAARLPG 120 RTDNEIKNFW NSTIKKRLKM NSAASSPATT ECASPPEPKL DGGSASCLDL TSLEDGSHHG 180 MKSMWRIDSS SSPSSSSSIQ QQSRPSTMAP AANRGYGGLL LPLPNQFCGV APSTHTSVPP 240 FFHDHSSFKQ VSPLRTGGYY PHGMAMERGG GSCFTGEEAV GGGGEHSVLF NVPPLLEPMA 300 VTLQDQTLMA ATGNSDDNHR NINSTAEGTT LSSKNGCNIN DDNNSKNNIN SVVSYWEQHG 360 HQQHMSRNVV MGEWDLEELM KDVSCLPFLD FQVE

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

SGRAMRKPVE CPATKCSGGA APGNSNVAAA AAKLRKGLWS PEEDERLVAY MLRSGQGSWS  60
DVARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEDLI VNLHAILGNR WSQIAARLPG  120
RTDNEIKNFW NSTIKKRLKM NSAASSPATT ECASPPEPKL DGGSASCLDL TSLEDGSHHG  180
MKSMWRIDSS SSPSSSSSIQ QQSRPSTMAP AANRGYGGLL LPLPNQFCGV APSTHTSVPP  240
FFHDHSSFKQ VSPLRTGGYY PHGMAMERGG GSCFTGEEAV GGGGEHSVLF NVPPLLEPMA  300
VTLQDQTLMA ATGNSDDNHR NINSTAEGTT LSSKNGCNIN DDNNSKNNIN SVVSYWEQHG  360
HQQHMSRNVV MGEWDLEELM KDVSCLPFLD FQVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12870.1	4e-65	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG017510.1