PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG018270.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 194aa    MW: 22587.9 Da    PI: 9.3098
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG018270.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.44.1e-1762155191
              FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                       +++n+Y+k +GFsv + + +++   k n+e+++ t++ +k+gk++e +k+  +  r++ +  +t+Ck  ++++++  g we+t+ +l HnHel
  TRIDC5BG018270.3  62 EYFNFYSKVAGFSVATVAISRTtsrKSNNEVKRITMKYNKWGKTKEIEKDyIVPMRKSIVIAKTDCKVVMVISEK-GGLWEITRQQLVHNHEL 153
                       59***********9765554444559999***************9988887899999****************99.****************9 PP

              FAR1  90 ap 91 
                       +p
  TRIDC5BG018270.3 154 TP 155
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MGQKPVLQLE FGQDAEDEFL DEDIERFLQN EQDAALEGNL MNTSSNFKPH LGMQFKTKEA  60
QEYFNFYSKV AGFSVATVAI SRTTSRKSNN EVKRITMKYN KWGKTKEIEK DYIVPMRKSI  120
VIAKTDCKVV MVISEKGGLW EITRQQLVHN HELTPNSRFF RSHKYMSDEE KCLIRVLKHT  180
NLESRRIVAV LAYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.25e-08FAR1 family protein