PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG018270.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 369aa    MW: 42264.6 Da    PI: 4.8853
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG018270.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.51.6e-16237330191
              FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                       +++n+Y+k +GFsv + + +++   k n+e+++ t++ +k+gk++e +k+  +  r++ +  +t+Ck  ++++++  g we+t+ +l HnHel
  TRIDC5BG018270.4 237 EYFNFYSKVAGFSVATVAISRTtsrKSNNEVKRITMKYNKWGKTKEIEKDyIVPMRKSIVIAKTDCKVVMVISEK-GGLWEITRQQLVHNHEL 328
                       59***********9765554444559999***************9988887899999****************99.****************9 PP

              FAR1  90 ap 91 
                       +p
  TRIDC5BG018270.4 329 TP 330
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
AMGDGGEEEE GRSNRNHKRI EGDVVPDEQQ ERRSSEGNQH HQPQERSMMR ALTKDDLLRL  60
SQEELILNDT LSFTALLHSY IIYKVHSGDA STNVVETIQQ NYKSKVDGSF NTEIDNNTLE  120
GDLHHEVAES EDGGGESNPW DRNLFYNLNL QQEPEDVDIR GAGAKTNSSA DHSNEEGDRE  180
EQEDSLGQDA EDEFLDEDIE RFLQNEQDAA LEGNLMNTSS NFKPHLGMQF KTKEAQEYFN  240
FYSKVAGFSV ATVAISRTTS RKSNNEVKRI TMKYNKWGKT KEIEKDYIVP MRKSIVIAKT  300
DCKVVMVISE KGGLWEITRQ QLVHNHELTP NSRFFRSHKY MSDEEKCLIR VLKHTNLESR  360
RIVAVLAYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-07FAR1 family protein