PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG018270.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 355aa    MW: 40756.1 Da    PI: 5.0691
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG018270.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.61.5e-16223316191
              FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                       +++n+Y+k +GFsv + + +++   k n+e+++ t++ +k+gk++e +k+  +  r++ +  +t+Ck  ++++++  g we+t+ +l HnHel
  TRIDC5BG018270.5 223 EYFNFYSKVAGFSVATVAISRTtsrKSNNEVKRITMKYNKWGKTKEIEKDyIVPMRKSIVIAKTDCKVVMVISEK-GGLWEITRQQLVHNHEL 314
                       59***********9765554444559999***************9988887899999****************99.****************9 PP

              FAR1  90 ap 91 
                       +p
  TRIDC5BG018270.5 315 TP 316
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
GDGGEEEEGR SNRNHKRIEG DVVPDEQQER RSSEGNQHHQ PQERSMMRAL TKDDLLRLSQ  60
EELILNDTLS FTALLHSYII YKVHSGDAST NVVETIQQNY KSKTLEGDLH HEVAESEDGG  120
GESNPWDRNL FYNLNLQQEP EDVDIRGAGA KTNSSADHSN EEGDREEQED SLGQDAEDEF  180
LDEDIERFLQ NEQDAALEGN LMNTSSNFKP HLGMQFKTKE AQEYFNFYSK VAGFSVATVA  240
ISRTTSRKSN NEVKRITMKY NKWGKTKEIE KDYIVPMRKS IVIAKTDCKV VMVISEKGGL  300
WEITRQQLVH NHELTPNSRF FRSHKYMSDE EKCLIRVLKH TNLESRRIVA VLAYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-07FAR1 family protein