PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG020460.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 403aa MW: 41930.6 Da PI: 5.8069

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG020460.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.2	2e-40	99	214	2	110
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 a +k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai ++tgt++++a+++ + s+ s+ + ++ TRIDC5BG020460.1 99 ALAKRPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAILAATGTGTIPANFSsLNISRAASGTTRPAPfpala 191 5689*****************************************************************888444444444443333355555 PP TCP 89 .kaaksaakskksqksaasalnl 110 + +++s ++q++ +++l + TRIDC5BG020460.1 192 lHPHHHHHQSPHPQHDMSTMLGY 214 42222233333344443333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
SGGGGSGGGG GGGGGAPSSS NSGGGSAGGT SGSRGGGSDH HPHHPFYYAG PAEPNNVQQQ 60 PQPQQFIGSL AITPVVTDQA PASSAEKKAV APVTPSAGAL AKRPSKDRHT KVDGRGRRIR 120 MPALCAARVF QLTRELGHKS DGETIEWLLQ QAEPAILAAT GTGTIPANFS SLNISRAASG 180 TTRPAPFPAL ALHPHHHHHQ SPHPQHDMST MLGYNHLLPP PQEPPQDANS PGSFMRKRYR 240 EDLFKEDDER HDPNAPKARE QQVAPPAAMW AVAPNSAAPG GAFWMLPVSA SQAATARPTE 300 QSMWSFGGGG GSSTVQAPLQ FMSTRVNYPS SGGAMGGMPD TSIGMLAGLN AYDRGVGGTE 360 EEQQQQQQQE QDQQQEMEQQ RDGSGGGNEG EEDGDDDSGG EEE

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

SGGGGSGGGG GGGGGAPSSS NSGGGSAGGT SGSRGGGSDH HPHHPFYYAG PAEPNNVQQQ  60
PQPQQFIGSL AITPVVTDQA PASSAEKKAV APVTPSAGAL AKRPSKDRHT KVDGRGRRIR  120
MPALCAARVF QLTRELGHKS DGETIEWLLQ QAEPAILAAT GTGTIPANFS SLNISRAASG  180
TTRPAPFPAL ALHPHHHHHQ SPHPQHDMST MLGYNHLLPP PQEPPQDANS PGSFMRKRYR  240
EDLFKEDDER HDPNAPKARE QQVAPPAAMW AVAPNSAAPG GAFWMLPVSA SQAATARPTE  300
QSMWSFGGGG GSSTVQAPLQ FMSTRVNYPS SGGAMGGMPD TSIGMLAGLN AYDRGVGGTE  360
EEQQQQQQQE QDQQQEMEQQ RDGSGGGNEG EEDGDDDSGG EEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	8e-49	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG020460.1