PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG021990.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 239aa    MW: 25362.6 Da    PI: 8.2063
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG021990.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP84.58.6e-27131196171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       r+++sL+llt+kfl+ll+ ++ g+v+ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+irwkg
  TRIDC5BG021990.1 131 RYDSSLGLLTKKFLNLLKGAPGGMVDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNNIRWKG 196
                       6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MAAAAGGTSS EGAARVLLQR YQPFGSPPGE YHHFGPADGG GSADMTEAVV LRTPLKRKHN  60
REDNEVAESN DWMMSPGYAN AANSPIPTPP SGKGSKMSAK PKAAKGQKSC PQTPLFSGSP  120
GNPATPVGGC RYDSSLGLLT KKFLNLLKGA PGGMVDLNNA AETLEVQKRR IYDITNVLEG  180
IGLIEKKLKN NIRWKGIDDS RPGEVSDDMS ILQGDIEALT LQEHSLDGQI RLATSYLSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.16e-52E2F/DP family protein