PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG021990.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 231aa    MW: 25227.5 Da    PI: 5.1818
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG021990.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP84.58.1e-2793158171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       r+++sL+llt+kfl+ll+ ++ g+v+ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+irwkg
  TRIDC5BG021990.4  93 RYDSSLGLLTKKFLNLLKGAPGGMVDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNNIRWKG 158
                       6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
GGGSADMTEA VVLRTPLKRK HNREDNEVAE SNDWMMSPGY ANAANSPIPT PPSGKGSKMS  60
AKPKAAKGQK SCPQTPLFSG SPGNPATPVG GCRYDSSLGL LTKKFLNLLK GAPGGMVDLN  120
NAAETLEVQK RRIYDITNVL EGIGLIEKKL KNNIRWKGID DSRPGEVSDD MSILQGDIEA  180
LTLQEHSLDG QISEMRDKLR ELTEDENNQK WLYVTEDDIK SLPCFQVPFD L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.13e-66E2F/DP family protein