PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG022160.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 250aa    MW: 27160.5 Da    PI: 10.3438
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG022160.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1287.5e-40251642128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                       +pGfrF Pt++el+ +yL+++++g++  ++++vi+ vd+y+++P++L++    +  ++ ++w+fF++r++++ +g r+ r+t sgyWkatg+ 
  TRIDC5BG022160.3  25 TPGFRFYPTEDELLGFYLRHRLAGTTrSHVDRVIPVVDVYSHHPSHLRSmageASVQDAEQWFFFCPRAERELRGGRPARTTPSGYWKATGSP 117
                       69*********************9995666778**************8434532223566********************************* PP

               NAM  90 kevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         v+s+        +++++g+k+t+vfy+grap+g kt+W m+ey++
  TRIDC5BG022160.3 118 SCVFSSssssaaagNSKVIGVKRTMVFYQGRAPTGAKTTWKMNEYKA 164
                       ****99888888877777***************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
LQLIKLAMMT TTSSGGAGGD LLVSTPGFRF YPTEDELLGF YLRHRLAGTT RSHVDRVIPV  60
VDVYSHHPSH LRSMAGEASV QDAEQWFFFC PRAERELRGG RPARTTPSGY WKATGSPSCV  120
FSSSSSSAAA GNSKVIGVKR TMVFYQGRAP TGAKTTWKMN EYKAVAADND TTTRHQTTAP  180
LRLRNEFSVC RLYISTGTLR SFDRRPLNTS GNGQAAARRH VPSAANTASI GQAGNYQVFL  240
EHDLPSGAVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.16e-70NAC family protein