PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG022160.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 235aa    MW: 25441.5 Da    PI: 10.0809
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG022160.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM128.26.3e-40221612128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                       +pGfrF Pt++el+ +yL+++++g++  ++++vi+ vd+y+++P++L++    +  ++ ++w+fF++r++++ +g r+ r+t sgyWkatg+ 
  TRIDC5BG022160.4  22 TPGFRFYPTEDELLGFYLRHRLAGTTrSHVDRVIPVVDVYSHHPSHLRSmageASVQDAEQWFFFCPRAERELRGGRPARTTPSGYWKATGSP 114
                       69*********************9995666778**************8434532223566********************************* PP

               NAM  90 kevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         v+s+        +++++g+k+t+vfy+grap+g kt+W m+ey++
  TRIDC5BG022160.4 115 SCVFSSssssaaagNSKVIGVKRTMVFYQGRAPTGAKTTWKMNEYKA 161
                       ****99888888877777***************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
IKLAMMTTTS SGGAGGDLLV STPGFRFYPT EDELLGFYLR HRLAGTTRSH VDRVIPVVDV  60
YSHHPSHLRS MAGEASVQDA EQWFFFCPRA ERELRGGRPA RTTPSGYWKA TGSPSCVFSS  120
SSSSAAAGNS KVIGVKRTMV FYQGRAPTGA KTTWKMNEYK AVAADNDLRN EFSVCRLYIS  180
TGTLRSFDRR PLNTSGNGQA AARRHVPSAA NTASIGQAGN YQVFLEHDLP SGAVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.18e-69NAC family protein