PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG025010.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 84aa MW: 9369.62 Da PI: 11.9431

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG025010.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	22	4.1e-07	41	69	1	27
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng....k 27 s y+GV++++++gr++A+++d n+ + TRIDC5BG025010.2 41 SIYRGVTRHRWTGRFEAHLWDK--NCftsiQ 69 57****************9993..3333332 PP

Sequence ? help Back to Top
Protein Sequence Length: 84 aa Download sequence
QKAGSAKAKA APKRAKKDAS RRSKESDASA NGAAAAAKRS SIYRGVTRHR WTGRFEAHLW 60 DKNCFTSIQN KKKGRQGKKT HHFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	3e-14	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG025010.2