PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG025130.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 327aa    MW: 36093.9 Da    PI: 7.1761
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG025130.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.31.1e-151461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd +lv ++++ G+g+W++++   g+ R+ k+c++rw +yl
  TRIDC5BG025130.4 14 KGPWTPEEDIILVSYIQENGPGNWRAVPINTGLMRCSKSCRLRWTNYL 61
                      79********************************************97 PP
2Myb_DNA-binding47.54.1e-1567112148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++Tt E+ ++v++  +lG++ W++Ia++++  Rt++++k++w+++l
  TRIDC5BG025130.4  67 RGNFTTHEEGIIVHLQSLLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MGRPPCCHKV GVKKGPWTPE EDIILVSYIQ ENGPGNWRAV PINTGLMRCS KSCRLRWTNY  60
LRPGIRRGNF TTHEEGIIVH LQSLLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKQQ  120
AMGAIFAPPP PPPSISAETA INLPGAVHLD NHHHRYHHDA IAASSSTVDH GCYAACSNPE  180
VTQQHTTITM RRSPFADVAA DCSSSSYASS MDNISRLLDG FMKSSPPTAT DVKPNIAVVS  240
DPFMSFDRIS GTGTELAFVP GVQQQQQQPV LMGGISYDDE ATRQQQQLHH QLPLCSIEKW  300
LLDEAAEQVA DLMDLSDGGC SSLPLLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.11e-79MYB family protein