PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG025260.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 401aa MW: 43769 Da PI: 7.1276

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG025260.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.2	1.9e-50	21	149	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdee+++ yL +k + ++ +++ evd++++eP+dLp k++ +ekewyfF+++d ky+tg+r+nratk+gyWkatgkd+e++ TRIDC5BG025260.2 21 LPPGFRFHPTDEEIITSYLLRKFLDPSFVS-RAVGEVDLNSCEPRDLPGKANMGEKEWYFFVHKDLKYPTGSRANRATKEGYWKATGKDREIF 112 79***********************888.88***********99999************************************ PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +elvg+kktLvfy+grap+g k++Wvmhe+rle TRIDC5BG025260.2 113 KPrARELVGMKKTLVFYTGRAPRGAKSEWVMHEFRLE 149 9867788*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MVESIAATPS EEQGRGGGLS LPPGFRFHPT DEEIITSYLL RKFLDPSFVS RAVGEVDLNS 60 CEPRDLPGKA NMGEKEWYFF VHKDLKYPTG SRANRATKEG YWKATGKDRE IFKPRARELV 120 GMKKTLVFYT GRAPRGAKSE WVMHEFRLEG KSRGQTMNNP KDEWVVCKVF NKKGEVKATR 180 AADVDAEYSA VTTPNASSVV DAGEGAGDFT DSMFTIDPLC YIPNSDEYTS NQLPTKTTAT 240 TTNSAPPPYN ADYYYPSVPT TAGSFNLMSN YSLTNVPSNA QTSTAMASSV PAISGSSWQH 300 MLMNTAPHGM MSRRSYDVNL HEQQAIMMRA LEGVVGAQNF GEPAKGLQTP SSRVTAGSVL 360 PQQGKLGSYD DGELPYGNYD LASAAMTGRP AAANNLGARF Y

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MVESIAATPS EEQGRGGGLS LPPGFRFHPT DEEIITSYLL RKFLDPSFVS RAVGEVDLNS  60
CEPRDLPGKA NMGEKEWYFF VHKDLKYPTG SRANRATKEG YWKATGKDRE IFKPRARELV  120
GMKKTLVFYT GRAPRGAKSE WVMHEFRLEG KSRGQTMNNP KDEWVVCKVF NKKGEVKATR  180
AADVDAEYSA VTTPNASSVV DAGEGAGDFT DSMFTIDPLC YIPNSDEYTS NQLPTKTTAT  240
TTNSAPPPYN ADYYYPSVPT TAGSFNLMSN YSLTNVPSNA QTSTAMASSV PAISGSSWQH  300
MLMNTAPHGM MSRRSYDVNL HEQQAIMMRA LEGVVGAQNF GEPAKGLQTP SSRVTAGSVL  360
PQQGKLGSYD DGELPYGNYD LASAAMTGRP AAANNLGARF Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	9e-74	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG025260.2