PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG025400.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 567aa    MW: 60793.1 Da    PI: 6.5145
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG025400.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS410.31.7e-1251985592374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilk 92 
                        +lLl+cAe v++++l +aq++L ++ ela+p g+++qR+aayf+eA +arl++s+ +ly+ lp  + + ++    +++aa+++f+ +sP++k
  TRIDC5BG025400.2 198 LTLLLQCAESVNADNLDEAQTALLEIAELATPFGTSTQRVAAYFAEAVSARLVSSCLGLYAPLPHASPAASRlvNGRVAAAFQVFNGISPLVK 290
                       579************************************************************7776666665677788999*********** PP

              GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                       fsh+taNqaI ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp++R+Tg+g+    s ++le+tg+rL++fA++lg+pfef + va++
  TRIDC5BG025400.2 291 FSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGA----SMDALEATGKRLSDFADTLGLPFEFCP-VADK 378
                       *********************************************************....***************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                         +l++e+L v ++Ea+aV++ +  h+l+d ++s ++    +L l+k+l Pkvv++veq++ h ++sFl+rf+ea++yysalfdsl+a+++++
  TRIDC5BG025400.2 379 AGNLDPEKLGVTRREAVAVHWLH--HSLYDVTGSDSN----TLCLIKRLAPKVVTMVEQDLRH-TGSFLARFVEAIHYYSALFDSLDASYGED 464
                       **********************9..999999999999....**********************.889************************** PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       s er++vE++ll+rei+nv+a  g +r+ + + ++ Wr+rl ++GF++++l  +aa+qa lll +++sdgy++ ee+g+l lgWkd +L+++S
  TRIDC5BG025400.2 465 SPERHVVEQQLLSREIRNVLAVGGPSRTGDVK-FGCWRDRLARSGFGAASLAGSAAAQAALLLGMFPSDGYTLVEENGALKLGWKDLTLLTAS 556
                       **************************999887.************************************************************ PP

              GRAS 372 aWr 374
                       aWr
  TRIDC5BG025400.2 557 AWR 559
                       **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    
MVRKRPATDM DLPPPRRHVT GDLSDMTAGP PVLSSATAQL PALPSQLLPP FQLQQQVDHM  60
DVAAAAAPAQ AGEAANTTAF VDGIIRDIIG SSGAGVSVAQ LIHNLRLRSL LASDPAPPQQ  120
HQPALLPNAP MPMAALPPPP PDKRRREEER EPNNPPQSPK PPSAEETAAA AAAASAAVKE  180
RKEGQRRKQR DEEGLHLLTL LLQCAESVNA DNLDEAQTAL LEIAELATPF GTSTQRVAAY  240
FAEAVSARLV SSCLGLYAPL PHASPAASRL VNGRVAAAFQ VFNGISPLVK FSHFTANQAI  300
QEAFEREERV HIIDLDIMQG LQWPGLFHIL ASRPGGPPRV RLTGLGASMD ALEATGKRLS  360
DFADTLGLPF EFCPVADKAG NLDPEKLGVT RREAVAVHWL HHSLYDVTGS DSNTLCLIKR  420
LAPKVVTMVE QDLRHTGSFL ARFVEAIHYY SALFDSLDAS YGEDSPERHV VEQQLLSREI  480
RNVLAVGGPS RTGDVKFGCW RDRLARSGFG AASLAGSAAA QAALLLGMFP SDGYTLVEEN  540
GALKLGWKDL TLLTASAWRP MHATSGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein