PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG025400.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 638aa    MW: 68298.5 Da    PI: 6.4019
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG025400.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS409.92.4e-1252696302374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilk 92 
                        +lLl+cAe v++++l +aq++L ++ ela+p g+++qR+aayf+eA +arl++s+ +ly+ lp  + + ++    +++aa+++f+ +sP++k
  TRIDC5BG025400.3 269 LTLLLQCAESVNADNLDEAQTALLEIAELATPFGTSTQRVAAYFAEAVSARLVSSCLGLYAPLPHASPAASRlvNGRVAAAFQVFNGISPLVK 361
                       579************************************************************7776666665677788999*********** PP

              GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                       fsh+taNqaI ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp++R+Tg+g+    s ++le+tg+rL++fA++lg+pfef + va++
  TRIDC5BG025400.3 362 FSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGA----SMDALEATGKRLSDFADTLGLPFEFCP-VADK 449
                       *********************************************************....***************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                         +l++e+L v ++Ea+aV++ +  h+l+d ++s ++    +L l+k+l Pkvv++veq++ h ++sFl+rf+ea++yysalfdsl+a+++++
  TRIDC5BG025400.3 450 AGNLDPEKLGVTRREAVAVHWLH--HSLYDVTGSDSN----TLCLIKRLAPKVVTMVEQDLRH-TGSFLARFVEAIHYYSALFDSLDASYGED 535
                       **********************9..999999999999....**********************.889************************** PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       s er++vE++ll+rei+nv+a  g +r+ + + ++ Wr+rl ++GF++++l  +aa+qa lll +++sdgy++ ee+g+l lgWkd +L+++S
  TRIDC5BG025400.3 536 SPERHVVEQQLLSREIRNVLAVGGPSRTGDVK-FGCWRDRLARSGFGAASLAGSAAAQAALLLGMFPSDGYTLVEENGALKLGWKDLTLLTAS 627
                       **************************999887.************************************************************ PP

              GRAS 372 aWr 374
                       aWr
  TRIDC5BG025400.3 628 AWR 630
                       **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 638 aa     Download sequence    
MGSSSLLLFS SSSSASHSSY SHATASSSSH CHLLPCPPDF LLHLLDHQDQ EPAAMVRKRP  60
ATDMDLPPPR RHVTGDLSDM TAGPPVLSSA TAQLPALPSQ LLPPFQLQQQ VDHMDVAAAA  120
APAQAGEAAN TTAFVDGIIR DIIGSSGAGV SVAQLIHNVR EIIHPCNPGL ASLLELRLRS  180
LLASDPAPPQ QHQPALLPNA PMPMAALPPP PPDKRRREEE REPNNPPQSP KPPSAEETAA  240
AAAAASAAVK ERKEGQRRKQ RDEEGLHLLT LLLQCAESVN ADNLDEAQTA LLEIAELATP  300
FGTSTQRVAA YFAEAVSARL VSSCLGLYAP LPHASPAASR LVNGRVAAAF QVFNGISPLV  360
KFSHFTANQA IQEAFEREER VHIIDLDIMQ GLQWPGLFHI LASRPGGPPR VRLTGLGASM  420
DALEATGKRL SDFADTLGLP FEFCPVADKA GNLDPEKLGV TRREAVAVHW LHHSLYDVTG  480
SDSNTLCLIK RLAPKVVTMV EQDLRHTGSF LARFVEAIHY YSALFDSLDA SYGEDSPERH  540
VVEQQLLSRE IRNVLAVGGP SRTGDVKFGC WRDRLARSGF GAASLAGSAA AQAALLLGMF  600
PSDGYTLVEE NGALKLGWKD LTLLTASAWR PMHATSGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein