PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG026550.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 125aa MW: 13936.9 Da PI: 4.5221

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG026550.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	59.2	1.2e-18	1	56	45	100
DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +l++lp +r da+sslvyeA ar+rdPvyG++g i+ lqqq++ql+++la++++e TRIDC5BG026550.2 1 MLQELPAAQRADAVSSLVYEATARMRDPVYGCAGAISYLQQQVSQLQVQLAVAQAE 56 799*************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 125 aa Download sequence
MLQELPAAQR ADAVSSLVYE ATARMRDPVY GCAGAISYLQ QQVSQLQVQL AVAQAEILQR 60 INHPSPAAAF HLQELQQRQV QQQQQMQMDD DDKAYSSLVM QNDLMSTLLL QEACLKKDVS 120 ASVIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	5e-17	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG026550.2