PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG027470.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 241aa    MW: 25927.2 Da    PI: 8.8885
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG027470.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.92.2e-20666257
                      T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++R+++t+eql +Lee++++  r+p+a e+++++++l    +++ ++V++WFqN++a+e++
  TRIDC5BG027470.1  6 STRWCPTPEQLMILEEMYRSgVRTPNAVEIQQITAHLayygRIEGKNVFYWFQNHKARERQ 66
                      58*****************99**************************************97 PP
2Wus_type_Homeobox120.38.1e-39567264
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       ++tRW+PtpeQ++iLee+y+sG+rtPn+ eiq+ita+L+ yG+ie+kNVfyWFQN+kaRerq+
   TRIDC5BG027470.1  5 PSTRWCPTPEQLMILEEMYRSGVRTPNAVEIQQITAHLAYYGRIEGKNVFYWFQNHKARERQR 67
                       689***********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MPQTPSTRWC PTPEQLMILE EMYRSGVRTP NAVEIQQITA HLAYYGRIEG KNVFYWFQNH  60
KARERQRLRR RLCARHQQPS SPAAPPPPPP HTGAAGGGGN AAGAGAGVNA MHPAVMQLHH  120
HHHTYATSCF MAPQGYLQQE TAAAGALPVS GLEFAGKTSQ QQEWMMQQQM VMDNSNINNS  180
VAAAGGSSAA AGGGMNNMTP PPWPCCRPLR TLELFPTKST GGGLRDECSS SKSSSCSTST  240
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.14e-35WOX family protein