PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG033220.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 228aa    MW: 25062.2 Da    PI: 9.291
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG033220.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55e-2182131255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ +l+g
  TRIDC5BG033220.2  82 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDQAAYRLRG 131
                       59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
LPLHSHLSPT SPFSFPHAAY SGYPYGVQAQ AQTELSPAQM HYIQARLHLQ RQTGQPGQLG  60
PRPQPMKPAS VAAATPPRPQ KLYRGVRQRH WGKWVAEIRL PRNRTRLWLG TFDTAEEAAL  120
AYDQAAYRLR GDAARLNFPD NAASRGPLHA SVDAKLQTLC QNITASKNAK KSASVSSAES  180
SPSPAATTAA DVPEMQQLDF SEAPWDEAAC FALTKYPSYE IDWDSLLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.13e-37ERF family protein