PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG033760.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 694aa    MW: 79057.4 Da    PI: 7.9199
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG033760.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1812.1e-2587175289
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                        fY +YA +vGFsvr+++s+ksk +++i++ +fvCskeg+++e++    +k+r++ a+ r gC+a+l+v ++ d+kw+ tkl++eHnHe+
  TRIDC5BG033760.11  87 FYIAYAGRVGFSVRIARSRKSKCSESIIMLRFVCSKEGFSKEKRVVaGKKTRKRLASIREGCNAMLEVLRRGDNKWVATKLVKEHNHEV 175
                        9**************************************999887646777888899******************************96 PP
2FAR162.71.1e-19209295291
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                        fY +YA ++GF+vr+++s+ks ++++ ++ ++vCs++ +++ ++++     ++r  +r gC a +++ ++++g w+v+kl leH+Hel+p
  TRIDC5BG033760.11 209 FYYSYAIRAGFEVRVRQSRKS-QDESLKMLKLVCSRHRYHSGRENN--GDDTKRDPSRDGCSALFEIIRKDKGIWRVSKLILEHTHELNP 295
                        9*******************9.6777***************99988..88899999*******************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 694 aa     Download sequence    
MEPQGVELED DSINFWASLG VSTHVHGVDQ MALHNVHILD HQGQSLPPAV VSHPESVCKE  60
LFPVEVDPCL EPRVGMEFES GEAAKTFYIA YAGRVGFSVR IARSRKSKCS ESIIMLRFVC  120
SKEGFSKEKR VVAGKKTRKR LASIREGCNA MLEVLRRGDN KWVATKLVKE HNHEVGMPST  180
VHYIATESDT MVDPYIDMEF ESLESAKTFY YSYAIRAGFE VRVRQSRKSQ DESLKMLKLV  240
CSRHRYHSGR ENNGDDTKRD PSRDGCSALF EIIRKDKGIW RVSKLILEHT HELNPAPASS  300
VCCVRSQVEK WLEAMHVRPP VSFVTELNQE MAAAAAKVLP DTCHIFCEKH ILGTVKEELH  360
SIYPGLDHFI TDLRKCIDGC RIEESFESCW ESVLMKHGFR NNEHLQSLYD IRKRWAPAYT  420
KQSFHARNLL AQSCENLEKI IDTYFSSKTQ LQVAVQQLEQ AICNFHAKEA QADYLTMFQL  480
PALRTASPVE KQAGLVFSRK VFDIFQEQFA ESFGYHAERL EDRMLHKYRL TVDDGDEEAH  540
IVSFSPDQTT VCCSCCLFES CGILCRHALR VFIIEGVRFL PKAYVLKRWT KHAKSTVTLD  600
NYIELRGYCE DPSTSRYNDL CYDAIKCAKE GSTSTERYKI AKEALCKALD EIMPTRNIRE  660
QNSQNCTTSL KSPVKKFGTA KGTSGKSIKR PAFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-79FAR1 family protein