PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG033760.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 330aa MW: 37167.4 Da PI: 8.3308

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG033760.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.7	6.1e-26	95	183	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY +YA +vGFsvr+++s+ksk +++i++ +fvCskeg+++e++ +k+r++ a+ r gC+a+l+v ++ d+kw+ tkl++eHnHe+ TRIDC5BG033760.3 95 FYIAYAGRVGFSVRIARSRKSKCSESIIMLRFVCSKEGFSKEKRVVaGKKTRKRLASIREGCNAMLEVLRRGDNKWVATKLVKEHNHEV 183 9************************************999887646777888899****************************96 PP
2	FAR1	64.4	3.2e-20	217	303	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YA ++GF+vr+++s+ks ++++ ++ ++vCs++ +++ ++++ ++r +r gC a +++ ++++g w+v+kl leH+Hel+p TRIDC5BG033760.3 217 FYYSYAIRAGFEVRVRQSRKS-QDESLKMLKLVCSRHRYHSGRENN--GDDTKRDPSRDGCSALFEIIRKDKGIWRVSKLILEHTHELNP 303 9*****************9.6777***********99988..88899999*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MEVGGQAMME PQGVELEDDS INFWASLGVS THVHGVDQMA LHNVHILDHQ GQSLPPAVVS 60 HPESVCKELF PVEVDPCLEP RVGMEFESGE AAKTFYIAYA GRVGFSVRIA RSRKSKCSES 120 IIMLRFVCSK EGFSKEKRVV AGKKTRKRLA SIREGCNAML EVLRRGDNKW VATKLVKEHN 180 HEVGMPSTVH YIATESDTMV DPYIDMEFES LESAKTFYYS YAIRAGFEVR VRQSRKSQDE 240 SLKMLKLVCS RHRYHSGREN NGDDTKRDPS RDGCSALFEI IRKDKGIWRV SKLILEHTHE 300 LNPAPASSVC CVRSQGDLTR MRTRSISSGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	3e-32	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG033760.3